NAVYMAN

I just received my Spec stage 1 clutch and aluminum flywheel from AM and going to do the install this weekend with help from a friend, I have read about people having issues with misfire codes and having to do the crank position relearn. It looks like its kind of random and don't happen to everyone, so is there anything I can do to keep this from happening and if it does can the relearn process be done with all the Mods on the car? Thanks for any help!