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Nope. The 99/00 cars had a spoiler unique to their model years, the "pedastal" type you have is on all 01-04 cars except 03/04 Cobra which had a spoiler unique to that particular model.
Oh I misunderstood you. Dunno what to tell you about that; maybe the previous owner liked the 99/00 one better and swapped, maybe due to an accident the entire decklid was replaced with one from an earlier model year, maybe... Could speculate on this one all day. It's also possible that Ford had a few leftover spoilers and stuck one on your car.
I've seen ones on ebay on 01's and newer like mine. maybe they were just using up what they had laying around. but yer right, we could guess all day on it