Topless Stang

I've finally had my fill of these lights staying light on my dash. I had an issue wth my charging system a while back and got a jump from someone when my battery was dead. The moron connected the cables backwards on his end. As soon as he connected his my end was sparking so I immediately removed it and was able to get a jump and go about my business. No harm no foul, right? Since then my ABS/TCS lights have stayed on. After doing some reading I thought it may be faulty wires connected to the speed sensors, so I waited until I had time to do my suspension work and while all the wheels were off I checked and everything seemed ok. I also cleaned them off since they were rather dirty. I still have the same problem, so I decided to pull codes with my tuner. There were quite a few, so I cleared them and pulled again. All of the codes came back. A few did have a description, but the majority didn't and none of them seemed to pertain to my ABS/TCS issue. I was hoping if I posted them here someone might be able to tell me what they were or point my in the right direction. I currently have the stock ATI tune that came with my ProCharger flashed to the computer. I'm not having any issues that I can detect, but something may be going on that I can't see.

Codes:
P003F
P0030
U0003
U3E00
P30C0
P0FDF
B0030
U001F
P07C0
C20C0
P3E07
P00E0
C3000
U3FFF
P003F
P00FF

Also after I cleared the codes, I re-read them without turning car off and all of the codes remained, almost like they were never cleared.