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Mines the same way, I really noticed mine after I put an aftermarket shifter in, also at the same time I put long tubes on it, so I guess it’s one of the two.
I had the same thing too. When installing my headers, i used some header wrap around the headers to somewhat keep the radiant heat inside the exhaust instead of the cabin. I know, i know....... my headers are going to rust off yadda yadda yadda..... well they didnt. Anyway, it worked. The floor gets a little warm on long cruises, but other than that, it stays at a tolerable level.
Same issue here with my 96GT. Strange thing is, it seems to have gotton worse when I swapped the auto out for a T45. I would think it would be the other way around though.